New to Bones--Can someone suggest the best episodes, shippy or personal?

Here are my favorites from each season: Season 1 - Two Bodies in the Lab, Season 2 - Aliens in a Spaceship, Season 3 - The Verdict in the Story, Season 4 - The Passenger in the Oven, Season 5 - The Parts in the Sum of the Whole, and Season 6 - The Hole in the Heart. Those are my tops but I love them all!!

since you are new, i not gonna tell you whats in the episode, but i suggest you watch the pilot to get a good idea of the show, and if you dont wanna watch the entire series ( BUT I STRONGLY SUGGEST YOU DO) these are some episode i think are really good, important pertaining to the story:)

season 1: the man in the fall out shelter( has important info about bren past), two bodies in a lab( B&B <3), the women in limbo ( also abt bren past)
season 2:aliens in a spaceship (B&B cuteness)
season 3:"The Baby in the Bough"(B&B cuteness), "The Verdict in the Story"( storyline importance), "The Pain in the Heart" ( extremely important pertaining to zack)
season 4:"The Critic in the Cabernet" ( B&B importance),     "The End in the Beginning" ( special epi),
season 5: "Harbingers in the Fountain" ( interesting epi), "The Goop on the Girl" ( emily sister, guest stars), "The Parts in the Sum of the Whole" ( extremely important *****), "The Beginning in the End" ( important)
season 6: "The Doctor in the Photo" ( so important), "The Bullet in the Brain" ( interesting epi), "The Finder" ( if you are interested in bones spin off), The Change in the Game" ( important to story)

as fro season 7, its not long,just watch the whole thing :)

Personally, Aliens in a Spaceship, The Killer in the Concrete, Man on Death Row, The Man in the Cell, The Santa in the Slush, and The Change in the Game are my favorites. However, if you haven't already, watch the pilot episode to get a general idea of all of the characters and what they do. I hope this helps you!